CDS

Accession Number TCMCG016C18326
gbkey CDS
Protein Id OMO69549.1
Location join(<445..534,746..853,952..1155,1433..1558,1633..2291,2747..2892,2980..3132,3374..3488,4045..6253)
Organism Corchorus capsularis
locus_tag CCACVL1_19432

Protein

Length 1269aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01011994.1
Definition hypothetical protein CCACVL1_19432, partial [Corchorus capsularis]
Locus_tag CCACVL1_19432

EGGNOG-MAPPER Annotation

COG_category K
Description chromodomain-helicase-DNA-binding protein 1-like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K20092        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006293        [VIEW IN EMBL-EBI]
GO:0006294        [VIEW IN EMBL-EBI]
GO:0006296        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031334        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033683        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070911        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
GTAATTCAGCTAAGAAAAGCATGTAGCCATCCCTACCTCTTCCCTGGCATTGAGCCCGAGCCATTTGAAGAGGGTGAACACCTGGTCCAGGCAAGTGGTAAGCTTATGGTTCTGGACCAACTACTTAAGAAACTATATGATTCTGGGCATCGTGTCCTTCTCTTTGCTCAGATGACCAATACTCTGGACATTTTACAGGATTTTCTGGAGCTACGAAAATATTCCTATGAGCGGCTTGATGGATCGATTCGGGCTGAAGAGCGCTTCGCTGCAATAAGAAGTTTCAGCAAACGATCGGCTGAAGGGAGTTTGAATCCAGAATTTGACCAAAATGCTGCTTTTGTTTTCATGATCTCTACAAGAGCTGGGGGTGTTGGCTTGAACCTTGTAGCTGCTGATACTGTTATATTCTATGAGCAAGATTGGAATCCTCAGGTGGATAAGCAGGCTCTGCAGCGGGCACATAGAATAGGCCAAACAAATCATGTGTTGTCAATAAACCTAGTCACCGAACATAGTGTGGAAGAGGTCATCAAGCGGAGAGCAGATAGGAAGCTGCAGCTCAGTCATAATGTTGTAGGAGACCATGTCATGGATCAGGAGGGGAAAGAAATGGAAGGAGCTGAGATGGGCGATTTGCGATCTGTCATATTTGGGTTACACATGTTTGATCCAACTGACATAAATAACAAAGAATCAGATGACATAAAGACATCTGAGCTCAGTGCTATGGTTGAGAAAGTAATTGCAATGCGTCATGAAGAATCTTTAGGCAAGAATAATAGCAAGTTTGAGATGAATGCAGGGGATTTGTTTGATGGCCATGATGTTATTATGAGAGAGAACTCTTCTGTTGGTATTGATCCCGGTCTTGATGAGGCTTCATATCTCTCTTGGGTTGAAAAATTTAAGGCAGTTTCACAGTCAGGTGATACTCCAATTATGGAGTTGGAAAATAAAAGGAACTTTCCTGAGGACAGGCATCTGAAAGTTGAGGCTGCAAAAAAGAAGGCAGAAGACAAGAAGAAGACTAAGTGGGAAGCTCATGGATACCATTCACTGGCTGTCCAAGATCCTTGTCCAGTGGATGGAGATATGTTGTCGGATTCAGGTTCTGTTCTTTTTGTTCACGGAGATTGTACAGAACCATCAAAAGTGTGTCCATCTGAGCCTGCTATCATATTCAGTTGTATTGATAATTCTGGAAACTGGGGTCACGGTGGAATGTTTGCTGCCCTGGCAAAGCTTTCTTCTAGCATTCCTGAATCCTATGAACGGGCTTCTGAATTTCAAGACCTTCATCTTGGTGATCTTCATCTTATAAGAATCAATGATGGATGCGAGGAAAACAACACTCCACTATGGGTAGCTTTAGCTGTTGTACAATCTTATAATCCAAGGCGTAAAGTTCCCCGCAGTGACATTTCCATGCCTGATTTAGAGCGTTGCCTGTCAAAGGCATCGCACACAGCGGCTCAAAATTCTGCTTCGATACACATGCCGCGTATTGGGTATCAGGATGGATCAGATCGTTCACAATGGTACACCGTGGAACGTCTGCTACGAAAATATGCTTCCCTTTATGGTGTAAAGATCTATGTAGCTGAATTCCGTAATAGCGACTTTCTGTCGACGGGGATGGCGCTTAGTCATAGCTCTCATCATCATTCAGGGAAGCAACTCTTCTTATACCAGACTCCGCTCCGTTCTGTTCTCCGGTTCGCCGGTGTACAAGAGCGGAGCTGGGGTGATGAAGCAGAAAAATCTTCCAACAAGACCAAGAAGGCAAAATCCATGGCGCGTGTTATCAACTCTATGCCATGGTCAAGTGAGCTTGAATCCTCTCTTTCTTCCCTATCTCCTTCTCTTTCTAAAACCACAGTTTCTCAAACTCTTCGTCTCATTAAAGCTCCCTCTAAAGCTCTTCAGTTCTTCAACTGGGTTGAAAAAATGGGCTTCCCTCACACTGCTCAATCCTTCTTCATGATGCTTGAGATATTGGGTAAAGAAAGAAACCTTAATGCAGCTCGTAATTTGTTGCTTTCAATTGAGAAAAGGACTAATGGGTCTGTTAAACTTGAGGACCGGTTCTTTAACAGCTTGATTAGGAGCTATGGTAAAGCTGGGTTGTTTCAAGAGTCTATTCAGGTTTTTCAAACAATGAAAAGCATTGGTGTGTCTCCTTCAGTAGTTTCATTCAATAATCTTTTGCAAATATTGCTGAGAAGAGGACGCACTAGTATGGCAAAGAATGTGTTTGATGAAATGCTTAGTACGTATGGGGTTAATCCAGATGTTTATACTTTTAACATTTTAATTAGGGGGTTTTGCCTGAATTCAATGGTTGACGAGGGGTTTAGGCTTTTCAAGGAAATGGAGCAATTTAAATGTGATCCTGATATTGTTACTTATAATACAATTGTTGATGGCTTGTGTAGGGTGGGAAAGGTTGGAATTGCACGTAATGTGGTGAAAGGTATGAGCAAGAAAAGCTTGGATCTCAATCCGGGTGTTGTTACATATACTACTTTGGTTAGAGGGTATTGTATGAAGCAAGAAGTTGATGAAGCTTTGTTTGTTTTCCAGGAGATGATTAGTCAAGGGTTGAAGCCAAATAAGATTACTTACAATACTTTAATTAAAGGGCTCTGTGAGGTGCATAGGTATGATAAGATAAAAGATATTTTCGAGGGAATGGGAGAAGATGGAAGATTTATTCCGGATACGTGTACTTTCAACACGTTAATAAATGCACACTGCAATGCTGGAAACCTGGAAGAAGCATTGAATAGCTTCAAAAGGGTGTCAGAATTGAATGTACTACCAGATTCAGCAACGTATAGTGTTATCATCAGGACTTTGTGCCAAAGAGGGGATTTTGATAAGGCAGAGGAGTTTTTTGATGAGCTAGCAGAGAAGGAGATTTTGTTAAGTGATGCAGGTTGTACACCTTGTGTCGCTGCATATAATCCCATGTTTGAGTATTTATGTGGAAATGGAAAAACTAAGAAAGCTGAGAAGGTGTTTAGGCAGCTAATGAAGAGGGGTAGGCAAGACCCCTCTGCTTACAAGACTCTGATCTTAGGGCACTGCAGGGAAGGTACATTCAAAGCTGGATATGAGCTCTTAATATTGATGTTGAGAAGAGCTTTTAAACCCGATTTTGAGATTTATGACTCTTTGATAGGTGGTCTGTTGCAGACGGGTGAACCTCTTCTTGCTCACCTGACTCTAGAGAAGATGCTTAGAAGTTCGCATCGCCCTAAAACATCTTCTGTCCATTGTATACTTGCAGAACTTCTGAAAAAGAAATTTTCCCAGGAAGCAGCCAGTTTAGTAACTCTAATGCTGGACAGAAAAATTAGACAAAACATCCATCTATCAACCGAGACTGTAAAGTTGCTGTTTGCAAGACGGTTGCAAGATAAAGCATTCCAGATTATTAGATTACTTTATGATAGTGGCTATGTGGTTGACATGAAAGAATTGGTCGGTTTCCTTTGCCAGAGTGGAAAATTTTTAGAGGCATGCAAGATTTTGCAATTTAGTTTGGAAGAGGACAAAAGTGCTGATGTTGAAATGTGCAGCACAGTAATAGAAGGTCTGTGTAACAGCAAGAAACTTTCAGAAGCGTTTGGTTTATACTATGAATTGGTGGAGAGAGATAAACATCAACAGTTGAGATGTCTTGAAAATTTGAAAATTGCCTTAGAATCAGGAGGAAAGTTAAGTGAAGCTGAGTTTGTATCAAAGAGGATGTCGAACCAGATTTATAATGATGCTTCTCCACAACACACTACCAGGATGTAG
Protein:  
VIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKLMVLDQLLKKLYDSGHRVLLFAQMTNTLDILQDFLELRKYSYERLDGSIRAEERFAAIRSFSKRSAEGSLNPEFDQNAAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQTNHVLSINLVTEHSVEEVIKRRADRKLQLSHNVVGDHVMDQEGKEMEGAEMGDLRSVIFGLHMFDPTDINNKESDDIKTSELSAMVEKVIAMRHEESLGKNNSKFEMNAGDLFDGHDVIMRENSSVGIDPGLDEASYLSWVEKFKAVSQSGDTPIMELENKRNFPEDRHLKVEAAKKKAEDKKKTKWEAHGYHSLAVQDPCPVDGDMLSDSGSVLFVHGDCTEPSKVCPSEPAIIFSCIDNSGNWGHGGMFAALAKLSSSIPESYERASEFQDLHLGDLHLIRINDGCEENNTPLWVALAVVQSYNPRRKVPRSDISMPDLERCLSKASHTAAQNSASIHMPRIGYQDGSDRSQWYTVERLLRKYASLYGVKIYVAEFRNSDFLSTGMALSHSSHHHSGKQLFLYQTPLRSVLRFAGVQERSWGDEAEKSSNKTKKAKSMARVINSMPWSSELESSLSSLSPSLSKTTVSQTLRLIKAPSKALQFFNWVEKMGFPHTAQSFFMMLEILGKERNLNAARNLLLSIEKRTNGSVKLEDRFFNSLIRSYGKAGLFQESIQVFQTMKSIGVSPSVVSFNNLLQILLRRGRTSMAKNVFDEMLSTYGVNPDVYTFNILIRGFCLNSMVDEGFRLFKEMEQFKCDPDIVTYNTIVDGLCRVGKVGIARNVVKGMSKKSLDLNPGVVTYTTLVRGYCMKQEVDEALFVFQEMISQGLKPNKITYNTLIKGLCEVHRYDKIKDIFEGMGEDGRFIPDTCTFNTLINAHCNAGNLEEALNSFKRVSELNVLPDSATYSVIIRTLCQRGDFDKAEEFFDELAEKEILLSDAGCTPCVAAYNPMFEYLCGNGKTKKAEKVFRQLMKRGRQDPSAYKTLILGHCREGTFKAGYELLILMLRRAFKPDFEIYDSLIGGLLQTGEPLLAHLTLEKMLRSSHRPKTSSVHCILAELLKKKFSQEAASLVTLMLDRKIRQNIHLSTETVKLLFARRLQDKAFQIIRLLYDSGYVVDMKELVGFLCQSGKFLEACKILQFSLEEDKSADVEMCSTVIEGLCNSKKLSEAFGLYYELVERDKHQQLRCLENLKIALESGGKLSEAEFVSKRMSNQIYNDASPQHTTRM